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Developmental Validation of a Single-Tube Amplification of the 13 CODIS STR Loci, D2S1338, D19S433, and Amelogenin: The AmpFLSTR Identifiler PCR Amplification Kit

NCJ Number
207712
Journal
Journal of Forensic Sciences Volume: 49 Issue: 6 Dated: November 2004 Pages: 1265-1277
Author(s)
Patrick J. Collins B.A.; Lori K. Hennessy Ph.D.; Craig S. Leibelt A.B.; Rhonda K. Roby MPH; Dennis J. Reeder Ph.D.; Paul A. Foxall Ph.D.
Date Published
November 2004
Length
13 pages
Annotation
This report presents the results of validation studies on the AmpFLSTR Identifiler PCR Amplification Kit, which has been developed to co-amplify and simultaneously detect all 15 internationally adopted STR (short tandem repeat) loci, including the 13 CODIS STR loci.
Abstract
The Identifiler kit addresses a significant impediment to more rapid genotype processing by eliminating the need for two amplifications and two lanes or injections of electrophoretic analysis to obtain complete CODIS or international profiles for a particular sample. Processing is further enhanced by increased allelic representation in the allelic ladder, decreasing the number of "off-ladder" alleles that must be rerun. In addition to reducing processing steps, the kit has been designed to preserve existing AmpFLSTR kit primer sequences and reaction conditions. In order to verify that the Identifiler kit performs as reliably and robustly as other STR multiplexes, a developmental validation was conducted according to relevant Quality Assurance Standards for Forensic DNA Testing Laboratories. A description of materials and methods addresses locus selection and characterization; PCR amplification; electrophoresis, detection, and analysis; balance calculations; primer set concentration; PCR reaction mix; thermal cycling parameters; species specificity, sensitivity, stability, and mixture studies; and population and concordance studies. The kit was found to meet the manufacturer's claims and is therefore reliable for use in human identity and parentage testing. 7 figures, 3 tables, and 33 references